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Journal article ยท Preprint article

Transcription and the aspect ratio of DNA: Paper

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Department of Applied Mathematics and Computer Science, Technical University of Denmark1

Department of Micro- and Nanotechnology, Technical University of Denmark2

Theoretical Biophysics, Department of Micro- and Nanotechnology, Technical University of Denmark3

Two separate regimes exist for the aspect ratio of DNA. A low aspect regime where DNA will twist further under strain and a high aspect regime where DNA will untwist under strain. The question of the overall geometry, i.e. the aspect ratio, of DNA is revisited from the perspective of a geometrical analysis of transcription.

It is shown that under certain reasonable assumptions transcription is only possible if the aspect ratio is in the regime corresponding to further twisting. We find this constraint to be in agreement with long-established crystallographic studies of DNA.

Language: English
Publisher: IOP Publishing
Year: 2013
Pages: 093008
ISSN: 13672630
Types: Journal article and Preprint article
DOI: 10.1088/1367-2630/15/9/093008

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