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Conference paper

Optimal Packed String Matching

From

Intel Research and Development Center1

Algorithms and Logic, Department of Informatics and Mathematical Modeling, Technical University of Denmark2

Department of Informatics and Mathematical Modeling, Technical University of Denmark3

University of Haifa4

University of Liverpool5

Università di Pisa6

In the packed string matching problem, each machine word accommodates – characters, thus an n-character text occupies n/– memory words. We extend the Crochemore-Perrin constantspace O(n)-time string matching algorithm to run in optimal O(n/–) time and even in real-time, achieving a factor – speedup over traditional algorithms that examine each character individually.

Our solution can be efficiently implemented, unlike prior theoretical packed string matching work. We adapt the standard RAM model and only use its AC0 instructions (i.e., no multiplication) plus two specialized AC0 packed string instructions. The main string-matching instruction is available in commodity processors (i.e., Intel’s SSE4.2 and AVX Advanced String Operations); the other maximal-suffix instruction is only required during pattern preprocessing.

In the absence of these two specialized instructions, we propose theoretically-efficient emulation using integer multiplication (not AC0) and table lookup.

Language: English
Publisher: Schloss Dagstuhl-Leibniz-Zentrum fuer Informati
Year: 2011
Pages: 423-432
Proceedings: 31st IARCS Annual Conference on Foundations of Software Technology and Theoretical Computer Science
Series: Leibniz International Proceedings in Informatics
ISBN: 3939897345 and 9783939897347
ISSN: 18688969
Types: Conference paper
DOI: 10.4230/LIPIcs.FSTTCS.2011.423
ORCIDs: Bille, Philip

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