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Journal article

Production of the antimicrobial compound tetrabromopyrrole and the Pseudomonas quinolone system precursor, 2‑heptyl‑4‑quinolone, by a novel marine species Pseudoalteromonas galatheae sp. nov

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Department of Biotechnology and Biomedicine, Technical University of Denmark1

Section for Microbial and Chemical Ecology, Department of Biotechnology and Biomedicine, Technical University of Denmark2

Natural Product Discovery, Section for Microbial and Chemical Ecology, Department of Biotechnology and Biomedicine, Technical University of Denmark3

Bacterial Ecophysiology and Biotechnology, Section for Microbial and Chemical Ecology, Department of Biotechnology and Biomedicine, Technical University of Denmark4

Center for Microbial Secondary Metabolites, Centers, Technical University of Denmark5

Section for Synthetic Biology, Department of Biotechnology and Biomedicine, Technical University of Denmark6

Novel antimicrobials are urgently needed due to the rapid spread of antibiotic resistant bacteria. In a genome-wide analysis of Pseudoalteromonas strains, one strain (S4498) was noticed due to its potent antibiotic activity. It did not produce the yellow antimicrobial pigment bromoalterochromide, which was produced by several related type strains with which it shared less than 95% average nucleotide identity.

Also, it produced a sweet-smelling volatile not observed from other strains. Mining the genome of strain S4498 using the secondary metabolite prediction tool antiSMASH led to eight biosynthetic gene clusters with no homology to known compounds, and synteny analyses revealed that the yellow pigment bromoalterochromide was likely lost during evolution.

Metabolome profling of strain S4498 using HPLC-HRMS analyses revealed marked diferences to the type strains. In particular, a series of quinolones known as pseudanes were identifed and verifed by NMR. The characteristic odor of the strain was linked to the pseudanes. The highly halogenated compound tetrabromopyrrole was detected as the major antibacterial component by bioassay-guided fractionation.

Taken together, the polyphasic analysis demonstrates that strain S4498 belongs to a novel species within the genus Pseudoalteromonas, and we propose the name Pseudoalteromonas galatheae sp. nov. (type strain S4498T =NCIMB 15250T =LMG 31599T).

Language: English
Publisher: Nature Publishing Group UK
Year: 2020
Pages: 21630
ISSN: 20452322
Types: Journal article
DOI: 10.1038/s41598-020-78439-3
ORCIDs: Paulsen, Sara Skøtt , Petersen, Thomas Isbrandt , Buijs, Yannick , Strube, Mikael Lenz , Sonnenschein, Eva , Larsen, Thomas Ostenfeld and Gram, Lone

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