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Journal article

Reversal of viral and epigenetic HLA class I repression in Merkel cell carcinoma

From

Dana-Farber Cancer Institute1

National Institutes of Health2

Technical University of Denmark3

Broad Institute of Harvard University and Massachusetts Institute of Technology4

University of British Columbia5

Harvard University6

Brigham and Women’s Hospital7

Single Cell Omics, Bioinformatics, Department of Health Technology, Technical University of Denmark8

Bioinformatics, Department of Health Technology, Technical University of Denmark9

Department of Health Technology, Technical University of Denmark10

Boston University11

...and 1 more

Cancers avoid immune surveillance through an array of mechanisms, including perturbation of HLA class I antigen presentation. Merkel cell carcinoma (MCC) is an aggressive, HLA-I–low, neuroendocrine carcinoma of the skin often caused by the Merkel cell polyomavirus (MCPyV). Through the characterization of 11 newly generated MCC patient-derived cell lines, we identified transcriptional suppression of several class I antigen presentation genes.

To systematically identify regulators of HLA-I loss in MCC, we performed parallel, genome-scale, gain- and loss-of-function screens in a patient-derived MCPyV-positive cell line and identified MYCL and the non-canonical Polycomb repressive complex 1.1 (PRC1.1) as HLA-I repressors. We observed physical interaction of MYCL with the MCPyV small T viral antigen, supporting a mechanism of virally mediated HLA-I suppression.

We further identify the PRC1.1 component USP7 as a pharmacologic target to restore HLA-I expression in MCC.

Language: English
Publisher: American Society for Clinical Investigation
Year: 2022
ISSN: 15588238 and 00219738
Types: Journal article
DOI: 10.1172/JCI151666
ORCIDs: 0000-0001-9291-6179 , 0000-0002-0074-5163 , 0000-0001-8639-1572 , 0000-0002-4565-1654 , 0000-0003-3832-0897 , 0000-0002-6909-1460 , 0000-0002-7855-1000 , 0000-0003-1405-3667 , 0000-0003-2155-5710 , 0000-0002-6592-8710 , 0000-0002-5772-8743 , Pedersen, Christina B. , 0000-0001-8072-6650 , 0000-0003-2816-0260 , 0000-0001-7807-8658 , 0000-0002-8171-5109 , 0000-0002-2209-3944 , 0000-0001-7294-8683 , 0000-0003-3257-9056 , 0000-0003-2566-3145 , 0000-0002-1097-5229 , 0000-0001-6010-490X , Olsen, Lars R. , 0000-0001-5871-5306 , 0000-0002-3707-9889 , 0000-0002-0896-167X and 0000-0002-8496-6181

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