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Journal article

Ten years of CAZypedia: a living encyclopedia of carbohydrate-active enzymes

By Abbott, Wade1; Alber, Orly12; bayer, Ed12; Berrin, Jean-Guy23; Boraston, Alisdair34; Brumer, Harry45; Brzezinski, Ryszard56; Clarke, Anthony67; Cobucci-Ponzano, Beatrice68; Cockburn, Darrell69; Coutinho, Pedro2; Czjzek, Mirjam3; Dassa, Bareket12; Davies, Gideon John4; Eijsink, Vincent5; Eklöf, Jens45; Felice, Alfons6; Ficko-Blean, Elisabeth3; Fincher, Geoff7; Fontaine, Thierry8; Fujimoto, Zui9; Fujita, Kiyotaka10; Fushinobu, Shinya11; Gilbert, Harry13; Gloster, Tracey14; Goddard-Borger, Ethan15; Greig, Ian16; Hehemann, Jan-Hendrik17; Hemsworth, Glyn18; Henrissat, Bernard3; Hidaka, Masafumi11; Hurtado-Guerrero, Ramon19; Igarashi, Kiyohiko11; Ishida, Takuya11; Janeček, Štefan20; Jongkees, Seino11; Juge, Nathalie21; Kaneko, Satoshi22; Katayama, Takane24; Kitaoka, Motomitsu9; Konno, Naotake25; Kracher, Daniel6; Kulminskaya, Anna26; Lammerts van Bueren, Alicia27; Larsen, Stine28; Lee, Junho45; Linder, Markus29; Lo Leggio, Leila28; Ludwig, Roland6; Luis, Ana30; Maksimainen, Mirko31; Mark, Brian32; McLean, Richard33; Michel, Gurvan3; Montanier, Cedric23; Moracci, Marco68; Mori, Haruhide35; Nakai, Hiroyuki36; Nerinckx, Wim37; Ohnuma, Takayuki38; Pickersgill, Richard39; Piens, Kathleen40; Pons, Tirso41; Rebuffet, Etienne3; Reilly, Peter42; Remaud-Simeon, Magali43; Rempel, Brian45; Robinson, Kyle45; Rose, David44; Rouvinen, Juha46; Saburi, Wataru35; Sakamoto, Yuichi47; Sandgren, Mats40; Shaikh, Fathima45; Shoham, Yuval48; St. John, Franz49; Stahlberg, Jerry40; Suits, Michael50; Sulzenbacher, Gerlind3; Sumida, Tomomi51; Suzuki, Ryuichiro52; Svensson, Birte53,54,55; Taira, Toki22; Taylor, Ed57; Tonozuka, Takashi58; Urbanowicz, Breeanna59; Vaaje-Kolstad, Gustav5; Van den Ende, Wim60; Varrot, Annabelle3; Verluys, Maxime60; Vincent, Florence3; Vocadlo, David16; Wakarchuk, Warren61; Wennekes, Tom62; Williams, Rohan63; Williams, Spencer63; Wilkens, Casper53,55,64; Wilson, David65; Withers, Stephen45; Yaoi, Katsuro66; Yip, Vivian45; Zhang, Ran45 ...and 92 more

From

Agriculture and Agri-Food Canada1

Aix-Marseille Université2

CNRS3

University of York4

Norwegian University of Life Sciences5

University of Natural Resources and Life Sciences, Vienna6

University of Adelaide7

Institut Pasteur8

National Agriculture and Food Research Organization9

Kagoshima University10

The University of Tokyo11

Weizmann Institute of Science12

Newcastle University13

University of St Andrews14

Walter and Eliza Hall Institute of Medical Research15

Simon Fraser University16

Max Planck Institute for Marine Microbiology17

University of Leeds18

University of Zaragoza19

Slovak Academy of Sciences20

Quadram Institute21

University of the Ryukyus22

INRAE23

Ishikawa Prefectural University24

Utsunomiya University25

Petersburg Nuclear Physics Institute26

University of Groningen27

University of Copenhagen28

Aalto University29

University of Lisbon30

University of Oulu31

University of Manitoba32

University of Lethbridge33

University of Victoria BC34

Hokkaido University35

Niigata University36

Ghent University37

Kindai University38

Queen Mary University of London39

Swedish University of Agricultural Sciences40

CSIC - National Center for Biotechnology41

Iowa State University42

Institut national des sciences appliquées Lyon43

University of Waterloo44

University of British Columbia45

University of Eastern Finland46

Iwate Biotechnology Research Center47

Technion-Israel Institute of Technology48

United States Department of Agriculture49

Wilfrid Laurier University50

RIKEN51

Akita Prefectural University52

Section for Protein Chemistry and Enzyme Technology, Department of Biotechnology and Biomedicine, Technical University of Denmark53

Enzyme and Protein Chemistry, Section for Protein Chemistry and Enzyme Technology, Department of Biotechnology and Biomedicine, Technical University of Denmark54

Department of Biotechnology and Biomedicine, Technical University of Denmark55

Université de Sherbrooke56

University of Lincoln57

Tokyo University of Agriculture and Technology58

University of Georgia59

KU Leuven60

Toronto Metropolitan University61

Utrecht University62

University of Melbourne63

Enzyme Technology, Section for Protein Chemistry and Enzyme Technology, Department of Biotechnology and Biomedicine, Technical University of Denmark64

Cornell University65

National Institute of Advanced Industrial Science and Technology66

University of Guelph67

National Research Council of Italy68

Pennsylvania State University69

...and 59 more

CAZypedia was initiated in 2007 to create a comprehensive, living encyclopedia of the carbohydrate-active enzymes (CAZymes) and associated carbohydrate-binding modules involved in the synthesis, modification and degradation of complex carbohydrates. CAZypedia is closely connected with the actively curated CAZy database, which provides a sequence-based foundation for the biochemical, mechanistic and structural characterization of these diverse proteins.

Now celebrating its 10th anniversary online, CAZypedia is a successful example of dynamic, community-driven and expert-based biocuration.

Language: English
Publisher: Oxford University Press
Year: 2018
Pages: 3-8
ISSN: 09596658 and 14602423
Types: Journal article
DOI: 10.1093/glycob/cwx089
ORCIDs: Svensson, Birte and Wilkens, Casper

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