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Book chapter

Medial structure generation for registration of anatomical structures

In Skeletonization: Theory, Methods and Applications — 2017, pp. 313-344
From

Alma Medical Imaging1

Autonomous University of Barcelona2

Department of Applied Mathematics and Computer Science, Technical University of Denmark3

Visual Computing, Department of Applied Mathematics and Computer Science, Technical University of Denmark4

Copenhagen Center for Health Technology, Centers, Technical University of Denmark5

ICREA6

Medial structures (skeletons and medial manifolds) have shown capacity to describe shape in a compact way. In the field of medical imaging, they have been employed to enrich the description of organ anatomy, to improve segmentation, or to describe the organ position in relation to surrounding structures.

Methods for generation of medial structures, however, are prone to the generation of medial artifacts (spurious branches) that traditionally need to be pruned before the medial structure can be used for further computations. The act of pruning can affect main sections of the medial surface, hindering its performance as shape descriptor.

In this work, we present a method for the computation of medial structures that generates smooth medial surfaces that do not need to be explicitly pruned. Additionally, we present a validation framework for medial surface evaluation. Finally, we apply this method to create a parametric model of the cochlea shape that yields better registration results between cochleae.

Language: English
Publisher: Elsevier
Year: 2017
Edition: First edition
Pages: 313-344
Journal subtitle: Theory, Methods and Applications
ISBN: 0081012918 , 0081012926 , 9780081012918 and 9780081012925
Types: Book chapter
DOI: 10.1016/B978-0-08-101291-8.00013-4
ORCIDs: Kjer, Hans Martin and Paulsen, Rasmus Reinhold

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